ScanImage & Ephus Papers

Snapshot: 2013-04-01
Current total primary research publications: 258

1. Marvin JS, Borghuis BG, Tian L, et al. An optimized fluorescent probe for visualizing glutamate neurotransmission. Nature methods. 2013;10(2):162-70.

2. Beier KT, Borghuis BG, El-Danaf RN, et al. Transsynaptic tracing with vesicular stomatitis virus reveals novel retinal circuitry. Journal of Neuroscience. 2013;33(1):35-51.

3. Hooks BM, Mao T, Gutnisky DA, et al. Organization of cortical and thalamic input to pyramidal neurons in mouse motor cortex. The Journal of neuroscience?: the official journal of the Society for Neuroscience. 2013;33(2):748-60.

4. Oh WC, Hill TC, Zito K. Synapse-specific and size-dependent mechanisms of spine structural plasticity accompanying synaptic weakening. Proceedings of the National Academy of Sciences of the United States of America. 2013;110(4):E305-12.

5. Robles E, Filosa A, Baier H. Precise Lamination of Retinal Axons Generates Multiple Parallel Input Pathways in the Tectum. Journal of Neuroscience. 2013;33(11):5027-5039.

6. Horton NG, Wang K, Kobat D, et al. In vivo three-photon microscopy of subcortical structures within an intact mouse brain. Nature Photonics. 2013;7(3):205-209.

7. Takasaki KT, Ding JB, Sabatini BL. Live-Cell Superresolution Imaging by Pulsed STED Two-Photon Excitation Microscopy. Biophysical journal. 2013;104(4):770-7.

8. Oliveira AF, Yasuda R. An Improved Ras Sensor for Highly Sensitive and Quantitative FRET-FLIM Imaging. PloS one. 2013;8(1):e52874.

9. Mostany R, Anstey JE, Crump KL, et al. Altered Synaptic Dynamics during Normal Brain Aging. Journal of Neuroscience. 2013;33(9):4094-4104.

10. Rose T, Schoenenberger P, Jezek K, Oertner TG. Developmental Refinement of Vesicle Cycling at Schaffer Collateral Synapses. Neuron. 2013;77(6):1109-1121.

11. Wachowiak M, Economo MN, Diaz-Quesada M, et al. Optical Dissection of Odor Information Processing In Vivo Using GCaMPs Expressed in Specified Cell Types of the Olfactory Bulb. Journal of Neuroscience. 2013;33(12):5285-5300.

12. Schneider ER, Civillico EF, Wang SS-H. CALCIUM-BASED DENDRITIC EXCITABILITY AND ITS REGULATION IN THE DEEP CEREBELLAR NUCLEI. Journal of neurophysiology. 2013.

13. Hill TC, Zito K. LTP-induced long-term stabilization of individual nascent dendritic spines. The Journal of neuroscience?: the official journal of the Society for Neuroscience. 2013;33(2):678-86.

14. Petreanu L, Gutnisky DA, Huber D, et al. Activity in motor-sensory projections reveals distributed coding in somatosensation. Nature. 2012;489(7415):299-303.

15. Xiong Q, Oviedo HV, Trotman LC, Zador AM. PTEN Regulation of Local and Long-Range Connections in Mouse Auditory Cortex. Journal of Neuroscience. 2012;32(5):1643-1652.

16. Wu X, Fu Y, Knott G, et al. GABA Signaling Promotes Synapse Elimination and Axon Pruning in Developing Cortical Inhibitory Interneurons. Journal of Neuroscience. 2012;32(1):331-43.

17. Jacob V, Petreanu L, Wright N, Svoboda K, Fox K. Regular spiking and intrinsic bursting pyramidal cells show orthogonal forms of experience-dependent plasticity in layer v of barrel cortex. Neuron. 2012;73(2):391-404.

18. Seemann KM, Kiefersauer R, Jacob U, Kuhn B. Optical pH detection within a protein crystal. The journal of physical chemistry. B. 2012;116(33):9873-81.

19. Viswanathan S, Bandyopadhyay S, Kao JPY, Kanold PO. Changing Microcircuits in the Subplate of the Developing Cortex. Journal of Neuroscience. 2012;32(5):1589-1601.

20. Zariwala HA, Borghuis BG, Hoogland TM, et al. A Cre-Dependent GCaMP3 Reporter Mouse for Neuronal Imaging In Vivo. Journal of Neuroscience. 2012;32(9):3131-3141.

21. Akerboom J, Chen T-W, Wardill TJ, et al. Optimization of a GCaMP calcium indicator for neural activity imaging. Journal of Neuroscience. 2012;32(40):13819-40.

22. Ertürk A, Mauch CP, Hellal F, et al. Three-dimensional imaging of the unsectioned adult spinal cord to assess axon regeneration and glial responses after injury. Nature medicine. 2012;18(1):166-71.

23. Arttamangkul S, Lau EK, Lu H-W, Williams JT. Desensitization and Trafficking of mu-opioid Receptors in Locus Coeruleus Neurons: Modulation by Kinases. Molecular pharmacology. 2012;81(3):348-55.

24. Atallah BVV, Bruns W, Carandini M, Scanziani M. Parvalbumin-Expressing Interneurons Linearly Transform Cortical Responses to Visual Stimuli. Neuron. 2012;73(1):159-170.

25. Packer AM, Peterka DS, Hirtz JJ, et al. Two-photon optogenetics of dendritic spines and neural circuits. Nature Methods. 2012;9(12):1202-5.

26. Wilson NR, Runyan CA, Wang FL, Sur M. Division and subtraction by distinct cortical inhibitory networks in vivo. Nature. 2012;488(7411):343-8.

27. Nauhaus I, Nielsen KJ, Callaway EM. Nonlinearity of two-photon Ca2+ imaging yields distorted measurements of tuning for V1 neuronal populations. Journal of neurophysiology. 2012;107(3):923-36.

28. Apicella AJ, Wickersham IR, Seung HS, Shepherd GMG. Laminarly orthogonal excitation of fast-spiking and low-threshold-spiking interneurons in mouse motor cortex. Journal of Neuroscience. 2012;32(20):7021-33.

29. Suter BA, Migliore M, Shepherd GMG. Intrinsic Electrophysiology of Mouse Corticospinal Neurons: a Class-Specific Triad of Spike-Related Properties. Cerebral cortex (New York, N.Y.?: 1991). 2012.

30. Kiritani T, Wickersham IR, Seung HS, Shepherd GMG. Hierarchical connectivity and connection-specific dynamics in the corticospinal-corticostriatal microcircuit in mouse motor cortex. Journal of Neuroscience. 2012;32(14):4992-5001.

31. Gelbart MA, He B, Martin AC, et al. Volume conservation principle involved in cell lengthening and nucleus movement during tissue morphogenesis. Proceedings of the National Academy of Sciences of the United States of America. 2012;109(47):19298-303.

32. Nauhaus I, Nielsen KJ, Disney AA, Callaway EM. Orthogonal micro-organization of orientation and spatial frequency in primate primary visual cortex. Nature neuroscience. 2012;15(12):1683-90.

33. Marshel JH, Kaye AP, Nauhaus I, Callaway EM. Anterior-posterior direction opponency in the superficial mouse lateral geniculate nucleus. Neuron. 2012;76(4):713-20.

34. Gdalyahu A, Tring E, Polack P-O, et al. Associative fear learning enhances sparse network coding in primary sensory cortex. Neuron. 2012;75(1):121-32.

35. Brown CM, Rivera DR, Pavlova I, et al. In vivo imaging of unstained tissues using a compact and flexible multiphoton microendoscope. Journal of biomedical optics. 2012;17(4):040505.

36. Kwan AC, Dan Y. Dissection of cortical microcircuits by single-neuron stimulation in vivo. Current biology?: CB. 2012;22(16):1459-67.

37. Li Y, Lu H, Cheng P-lin, et al. Clonally related visual cortical neurons show similar stimulus feature selectivity. Nature. 2012;advance on.

38. Harvey CD, Coen P, Tank DW. Choice-specific sequences in parietal cortex during a virtual-navigation decision task. Nature. 2012;484(7392):62-8.

39. Rivera DR, Brown CM, Ouzounov DG, Webb WW, Xu C. Use of a lensed fiber for a large-field-of-view, high-resolution, fiber-scanning microendoscope. Optics letters. 2012;37(5):881-3.

40. Tritsch NX, Ding JB, Sabatini BL. Dopaminergic neurons inhibit striatal output through non-canonical release of GABA. Nature. 2012;490(7419):262-6.

41. Schärer Y-PZ, Shum J, Moressis A, Friedrich RW. Dopaminergic modulation of synaptic transmission and neuronal activity patterns in the zebrafish homolog of olfactory cortex. Frontiers in neural circuits. 2012;6:76.

42. Johnston DG, Denizet M, Mostany R, Portera-Cailliau C. Chronic In Vivo Imaging Shows No Evidence of Dendritic Plasticity or Functional Remapping in the Contralesional Cortex after Stroke. Cerebral cortex (New York, N.Y.?: 1991). 2012.

43. Lim H, Danias J. Label-free morphometry of retinal nerve fiber bundles by second-harmonic-generation microscopy. Optics letters. 2012;37(12):2316-8.

44. Ozden I, Dombeck DA, Hoogland TM, Tank DW, Wang SS-H. Widespread state-dependent shifts in cerebellar activity in locomoting mice. PloS one. 2012;7(8):e42650.

45. Paukert M, Bergles DE. Reduction of motion artifacts during in vivo two-photon imaging of brain through heartbeat triggered scanning. The Journal of physiology. 2012;590(Pt 13):2955-63.

46. Adesnik H, Bruns W, Taniguchi H, Huang ZJ, Scanziani M. A neural circuit for spatial summation in visual cortex. Nature. 2012;490(7419):226-31.

47. Wyatt RM, Tring E, Trachtenberg JT. Pattern and not magnitude of neural activity determines dendritic spine stability in awake mice. Nature neuroscience. 2012;15(7):949-51.

48. Farrar MJ, Bernstein IM, Schlafer DH, et al. Chronic in vivo imaging in the mouse spinal cord using an implanted chamber. Nature methods. 2012;9(3):297-302.

49. Lim H, Danias J. Effect of axonal micro-tubules on the morphology of retinal nerve fibers studied by second-harmonic generation. Journal of biomedical optics. 2012;17(11):110502.

50. Odermatt B, Nikolaev A, Lagnado L. Encoding of Luminance and Contrast by Linear and Nonlinear Synapses in the Retina. Neuron. 2012;73(4):758-773.

51. Xu N-long, Harnett MT, Williams SR, et al. Nonlinear dendritic integration of sensory and motor input during an active sensing task. Nature. 2012;492(7428):247-51.

52. Cruz-Martín A, Crespo M, Portera-Cailliau C. Glutamate induces the elongation of early dendritic protrusions via mGluRs in wild type mice, but not in fragile X mice. PloS one. 2012;7(2):e32446.

53. Rivera DR, Brown CM, Ouzounov DG, Webb WW, Xu C. Multifocal multiphoton endoscope. Optics letters. 2012;37(8):1349-51.

54. Zhu P, Fajardo O, Shum J, Zhang Schärer Y-P, Friedrich RW. High-resolution optical control of spatiotemporal neuronal activity patterns in zebrafish using a digital micromirror device. Nature protocols. 2012;7(7):1410-25.

55. Marra V, Burden JJ, Thorpe JR, et al. A preferentially segregated recycling vesicle pool of limited size supports neurotransmission in native central synapses. Neuron. 2012;76(3):579-89.

56. Kato HK, Chu MW, Isaacson JS, Komiyama T. Dynamic sensory representations in the olfactory bulb: modulation by wakefulness and experience. Neuron. 2012;76(5):962-75.

57. Huber D, Gutnisky DA, Peron S, et al. Multiple dynamic representations in the motor cortex during sensorimotor learning. Nature. 2012;484(7395):473-478.

58. Drocco JA, Wieschaus EF, Tank DW. The synthesis-diffusion-degradation model explains Bicoid gradient formation in unfertilized eggs. Physical biology. 2012;9(5):055004.

59. Kuhn B, Ozden I, Lampi Y, Hasan MT, Wang SS-H. An amplified promoter system for targeted expression of calcium indicator proteins in the cerebellar cortex. Frontiers in neural circuits. 2012;6:49.

60. Bundschuh ST, Zhu P, Schärer Y-PZ, Friedrich RW. Dopaminergic modulation of mitral cells and odor responses in the zebrafish olfactory bulb. The Journal of neuroscience?: the official journal of the Society for Neuroscience. 2012;32(20):6830-40.

61. Li Y-T, Ma W-P, Pan C-J, Zhang LI, Tao HW. Broadening of Cortical Inhibition Mediates Developmental Sharpening of Orientation Selectivity. The Journal of neuroscience?: the official journal of the Society for Neuroscience. 2012;32(12):3981-3991.

62. Scott BB, Gardner T, Ji N, Fee MS, Lois C. Wandering Neuronal Migration in the Postnatal Vertebrate Forebrain. The Journal of neuroscience?: the official journal of the Society for Neuroscience. 2012;32(4):1436-1446.

63. Andermann ML, Kerlin AM, Roumis DK, Glickfeld LL, Reid RC. Functional Specialization of Mouse Higher Visual Cortical Areas. Neuron. 2011;72(6):1025-1039.

64. Bégin S, Burgoyne B, Mercier V, et al. Coherent anti-Stokes Raman scattering hyperspectral tissue imaging with a wavelength-swept system. Biomedical optics express. 2011;2(5):1296-306.

65. Hooks BM, Hires SA, Zhang Y-X, et al. Laminar analysis of excitatory local circuits in vibrissal motor and sensory cortical areas. PLoS biology. 2011;9(1):e1000572.

66. Lam Y-W, Sherman SM. Functional organization of the thalamic input to the thalamic reticular nucleus. Journal of Neuroscience. 2011;31(18):6791-9.

67. Peñagarikano O, Abrahams BS, Herman EI, et al. Absence of CNTNAP2 Leads to Epilepsy, Neuronal Migration Abnormalities, and Core Autism-Related Deficits. Cell. 2011;147(1):235-246.

68. Ramsey AJ, Milenkovic M, Oliveira AF, et al. Impaired NMDA receptor transmission alters striatal synapses and DISC1 protein in an age-dependent manner. Proceedings of the National Academy of Sciences. 2011;108(14):5795.

69. Rosselet C, Fieschi M, Hugues S, Bureau I. Associative learning changes the organization of functional excitatory circuits targeting the supragranular layers of mouse barrel cortex. Frontiers in neural circuits. 2011;4:126.

70. Middleton JW, Kiritani T, Pedersen C, et al. Mice with behavioral evidence of tinnitus exhibit dorsal cochlear nucleus hyperactivity because of decreased GABAergic inhibition. Proceedings of the National Academy of Sciences. 2011;108(18):7601-6.

71. Lien AD, Scanziani M. In vivo Labeling of Constellations of Functionally Identified Neurons for Targeted in vitro Recordings. Frontiers in neural circuits. 2011;5:16.

72. Viaene AN, Petrof I, Sherman SM. Synaptic properties of thalamic input to layers 2/3 and 4 of primary somatosensory and auditory cortices. Journal of neurophysiology. 2011;105(1):279-92.

73. Mao T, Kusefoglu D, Hooks BM, et al. Long-Range Neuronal Circuits Underlying the Interaction between Sensory and Motor Cortex. Neuron. 2011;72(1):111-123.

74. Baden T, Esposti F, Nikolaev A, Lagnado L. Spikes in Retinal Bipolar Cells Phase-Lock to Visual Stimuli with Millisecond Precision. Current biology. 2011;21(22):1859-69.

75. Sheets PL, Suter BA, Kiritani T, et al. Corticospinal-specific HCN expression in mouse motor cortex: I(h)-dependent synaptic integration as a candidate microcircuit mechanism involved in motor control. Journal of neurophysiology. 2011;106(5):2216-31.

76. Miri A, Daie K, Arrenberg AB, et al. Spatial gradients and multidimensional dynamics in a neural integrator circuit. Nature Neuroscience. 2011;14(9):1150-9.

77. Blumhagen F, Zhu P, Shum J, et al. Neuronal filtering of multiplexed odour representations. Nature. 2011;479(7374):493-498.

78. Pugh JR, Jahr CE. Axonal GABAA receptors increase cerebellar granule cell excitability and synaptic activity. Journal of Neuroscience. 2011;31(2):565-74.

79. Tuthill JC, Chiappe ME, Reiser MB. Neural correlates of illusory motion perception in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 2011;108(23):9685-90.

80. Chalifoux JR, Carter AG. GABAB receptor modulation of voltage-sensitive calcium channels in spines and dendrites. Journal of Neuroscience. 2011;31(11):4221-32.

81. Berndt A, Schoenenberger P, Mattis J, et al. High-efficiency channelrhodopsins for fast neuronal stimulation at low light levels. Proceedings of the National Academy of Sciences of the United States of America. 2011;108(18):7595-600.

82. Dreosti E, Esposti F, Baden T, Lagnado L. In vivo evidence that retinal bipolar cells generate spikes modulated by light. Nature neuroscience. 2011;14(8):951-2.

83. Bock DD, Lee W-CA, Kerlin AM, et al. Network anatomy and in vivo physiology of visual cortical neurons. Nature. 2011;471(7337):177-82.

84. Kitamura K, Hausser M. Dendritic Calcium Signaling Triggered by Spontaneous and Sensory-Evoked Climbing Fiber Input to Cerebellar Purkinje Cells In Vivo. Journal of Neuroscience. 2011;31(30):10847-10858.

85. Mostany R, Portera-Cailliau C. Absence of large-scale dendritic plasticity of layer 5 pyramidal neurons in peri-infarct cortex. Journal of Neuroscience. 2011;31(5):1734-8.

86. Herman MA, Nahir B, Jahr CE. Distribution of extracellular glutamate in the neuropil of hippocampus. PloS one. 2011;6(11):e26501.

87. Qiu S, Anderson CT, Levitt P, Shepherd GMG. Circuit-specific intracortical hyperconnectivity in mice with deletion of the autism-associated Met receptor tyrosine kinase. Journal of Neuroscience. 2011;31(15):5855-64.

88. Ikrar T, Olivas ND, Shi Y, Xu X. Mapping inhibitory neuronal circuits by laser scanning photostimulation. Journal of visualized experiments?: JoVE. 2011;(56).

89. Miri A, Daie K, Burdine RD, Aksay E, Tank DW. Regression-based identification of behavior-encoding neurons during large-scale optical imaging of neural activity at cellular resolution. Journal of neurophysiology. 2011;105(2):964-80.

90. Marshel JH, Garrett ME, Nauhaus I, Callaway EM. Functional Specialization of Seven Mouse Visual Cortical Areas. Neuron. 2011;72(6):1040-1054.

91. Pugh JR, Jahr CE. NMDA Receptor Agonists Fail To Alter Release from Cerebellar Basket Cells. Journal of Neuroscience. 2011;31(46):16550-16555.

92. Acker CD, Yan P, Loew LM. Single-voxel recording of voltage transients in dendritic spines. Biophysical journal. 2011;101(2):L11-3.

93. Truong TV, Supatto W, Koos DS, Choi JM, Fraser SE. Deep and fast live imaging with two-photon scanned light-sheet microscopy. Nature Methods. 2011;8(9):757-60.

94. Kuhlman SJ, Tring E, Trachtenberg JT. Fast-spiking interneurons have an initial orientation bias that is lost with vision. Nature neuroscience. 2011;14(9):1121-3.

95. Christie JM, Chiu DN, Jahr CE. Ca(2+)-dependent enhancement of release by subthreshold somatic depolarization. Nature neuroscience. 2011;14(1):62-8.

96. Viaene AN, Petrof I, Sherman SM. Properties of the thalamic projection from the posterior medial nucleus to primary and secondary somatosensory cortices in the mouse. Proceedings of the National Academy of Sciences. 2011;108(44):18156-61.

97. Lewis TL, Mao T, Arnold DB. A role for myosin VI in the localization of axonal proteins. PLoS biology. 2011;9(3):e1001021.

98. Mellios N, Sugihara H, Castro J, et al. miR-132, an experience-dependent microRNA, is essential for visual cortex plasticity. Nature neuroscience. 2011;14(10):1240-2.

99. Mostaço-Guidolin LB, Ko AC-T, Popescu DP, et al. Evaluation of texture parameters for the quantitative description of multimodal nonlinear optical images from atherosclerotic rabbit arteries. Physics in medicine and biology. 2011;56(16):5319-34.

100. Woods GF, Oh WC, Boudewyn LC, Mikula SK, Zito K. Loss of PSD-95 Enrichment Is Not a Prerequisite for Spine Retraction. Journal of Neuroscience. 2011;31(34):12129-12138.

101. Viaene AN, Petrof I, Sherman SM. Synaptic Properties of Thalamic Input to the Subgranular Layers of Primary Somatosensory and Auditory Cortices in the Mouse. Journal of Neuroscience. 2011;31(36):12738-12747.

102. Borghuis BG, Tian L, Xu Y, et al. Imaging light responses of targeted neuron populations in the rodent retina. Journal of Neuroscience. 2011;31(8):2855-67.

103. Quillinan N, Lau EK, Virk M, von Zastrow M, Williams JT. Recovery from mu-opioid receptor desensitization after chronic treatment with morphine and methadone. Journal of Neuroscience. 2011;31(12):4434-43.

104. Sedlacek M, Tipton PW, Brenowitz SD. Sustained firing of cartwheel cells in the dorsal cochlear nucleus evokes endocannabinoid release and retrograde suppression of parallel fiber synapses. Journal of Neuroscience. 2011;31(44):15807-17.

105. Hamad MIK, Ma-Högemeier Z-L, Riedel C, et al. Cell class-specific regulation of neocortical dendrite and spine growth by AMPA receptor splice and editing variants. Development. 2011;138(19):4301-13.

106. De Pasquale R, Sherman SM. Synaptic Properties of Corticocortical Connections between the Primary and Secondary Visual Cortical Areas in the Mouse. Journal of Neuroscience. 2011;31(46):16494-16506.

107. Herzog E, Nadrigny F, Silm K, et al. In Vivo Imaging of Intersynaptic Vesicle Exchange Using VGLUT1Venus Knock-In Mice. Journal of Neuroscience. 2011;31(43):15544-15559.

108. Liu CC, Gao SS, Yuan T, et al. Biophysical mechanisms underlying outer hair cell loss associated with a shortened tectorial membrane. Journal of the Association for Research in Otolaryngology?: JARO. 2011;12(5):577-94.

109. Chalifoux JR, Carter AG. Glutamate Spillover Promotes the Generation of NMDA Spikes. Journal of Neuroscience. 2011;31(45):16435-16446.

110. Vesuna S, Torres R, Levene MJ. Multiphoton fluorescence, second harmonic generation, and fluorescence lifetime imaging of whole cleared mouse organs. Journal of biomedical optics. 2011;16(10):106009.

111. Stierl M, Stumpf P, Udwari D, et al. Light modulation of cellular cAMP by a small bacterial photoactivated adenylyl cyclase, bPAC, of the soil bacterium Beggiatoa. The Journal of biological chemistry. 2011;286(2):1181-8.

112. Farrar MJ, Wise FW, Fetcho JR, Schaffer CB. In vivo imaging of myelin in the vertebrate central nervous system using third harmonic generation microscopy. Biophysical journal. 2011;100(5):1362-71.

113. Ma W-P, Liu B-H, Li Y-T, et al. Visual representations by cortical somatostatin inhibitory neurons--selective but with weak and delayed responses. Journal of Neuroscience. 2010;30(43):14371-9.

114. Komiyama T, Sato TR, O'Connor DH, et al. Learning-related fine-scale specificity imaged in motor cortex circuits of behaving mice. Nature. 2010;464(7292):1182-6.

115. Seelig JD, Chiappe ME, Lott GK, et al. Two-photon calcium imaging from head-fixed Drosophila during optomotor walking behavior. Nature methods. 2010;7(7):535-40.

116. Chowdhury TG, Jimenez JC, Bomar JM, et al. Fate of cajal-retzius neurons in the postnatal mouse neocortex. Frontiers in neuroanatomy. 2010;4:10.

117. Cruz-Martín A, Crespo M, Portera-Cailliau C. Delayed stabilization of dendritic spines in fragile X mice. Journal of Neuroscience. 2010;30(23):7793-803.

118. Higley MJ, Sabatini BL. Competitive regulation of synaptic Ca2+ influx by D2 dopamine and A2A adenosine receptors. Nature neuroscience. 2010;13(8):958-66.

119. Guetg N, Abdel Aziz S, Holbro N, et al. NMDA receptor-dependent GABAB receptor internalization via CaMKII phosphorylation of serine 867 in GABAB1. Proceedings of the National Academy of Sciences of the United States of America. 2010;107(31):13924-9.

120. Heider B, Nathanson JL, Isacoff EY, Callaway EM, Siegel RM. Two-Photon Imaging of Calcium in Virally Transfected Striate Cortical Neurons of Behaving Monkey. PloS one. 2010;5(11):e13829.

121. Patterson MA, Szatmari EM, Yasuda R. AMPA receptors are exocytosed in stimulated spines and adjacent dendrites in a Ras-ERK-dependent manner during long-term potentiation. Proceedings of the National Academy of Sciences of the United States of America. 2010;107(36):15951-6.

122. Wilbrecht L, Holtmaat A, Wright N, Fox K, Svoboda K. Structural plasticity underlies experience-dependent functional plasticity of cortical circuits. Journal of Neuroscience. 2010;30(14):4927-32.

123. Chiappe ME, Seelig JD, Reiser MB, Jayaraman V. Walking modulates speed sensitivity in Drosophila motion vision. Current biology. 2010;20(16):1470-5.

124. Xia A, Gao SS, Yuan T, et al. Deficient forward transduction and enhanced reverse transduction in the alpha tectorin C1509G human hearing loss mutation. Disease models & mechanisms. 2010;3(3-4):209-23.

125. Chalifoux JR, Carter AG. GABAB receptors modulate NMDA receptor calcium signals in dendritic spines. Neuron. 2010;66(1):101-13.

126. Oviedo HV, Bureau I, Svoboda K, Zador AM. The functional asymmetry of auditory cortex is reflected in the organization of local cortical circuits. Nature neuroscience. 2010;13(11):1413-20.

127. Mostaço-Guidolin LB, Sowa MG, Ridsdale A, et al. Differentiating atherosclerotic plaque burden in arterial tissues using femtosecond CARS-based multimodal nonlinear optical imaging. Biomedical optics express. 2010;1(1):59-73.

128. Theyel BB, Llano DA, Sherman SM. The corticothalamocortical circuit drives higher-order cortex in the mouse. Nature neuroscience. 2010;13(1):84-8.

129. Kerlin AM, Andermann ML, Berezovskii VK, Reid RC. Broadly tuned response properties of diverse inhibitory neuron subtypes in mouse visual cortex. Neuron. 2010;67(5):858-71.

130. Parra SG, Chia TH, Zinter JP, Levene MJ. Multiphoton microscopy of cleared mouse organs. Journal of biomedical optics. 2010;15(3):036017.

131. Lam Y-W, Sherman SM. Functional organization of the somatosensory cortical layer 6 feedback to the thalamus. Cerebral cortex. 2010;20(1):13-24.

132. Christie LA, Russell TA, Xu J, et al. AMPA receptor desensitization mutation results in severe developmental phenotypes and early postnatal lethality. Proceedings of the National Academy of Sciences. 2010;107(20):9412-7.

133. Shi Y, Nenadic Z, Xu X. Novel use of matched filtering for synaptic event detection and extraction. PloS one. 2010;5(11):e15517.

134. Heneka MTM, Nadrigny F, Regen T, et al. Locus ceruleus controls Alzheimer's disease pathology by modulating microglial functions through norepinephrine. Proceedings of the National Academy of Sciences of the United States of America. 2010;107(13):6058-63.

135. Anderson CT, Sheets PL, Kiritani T, Shepherd GMG. Sublayer-specific microcircuits of corticospinal and corticostriatal neurons in motor cortex. Nature neuroscience. 2010;13(6):739-44.

136. Wiechert MT, Judkewitz B, Riecke H, Friedrich RW. Mechanisms of pattern decorrelation by recurrent neuronal circuits. Nature neuroscience. 2010;13(8):1003-10.

137. Dorostkar MMM, Dreosti E, Odermatt B, Lagnado L. Computational processing of optical measurements of neuronal and synaptic activity in networks. Journal of neuroscience methods. 2010;188(1):141-50.

138. Ko ACT, Ridsdale A, Smith MSD, et al. Multimodal nonlinear optical imaging of atherosclerotic plaque development in myocardial infarction-prone rabbits. Journal of biomedical optics. 2010;15(2):020501.

139. Holbro N, Grunditz A, Wiegert JS, Oertner TG. AMPA receptors gate spine Ca(2+) transients and spike-timing-dependent potentiation. Proceedings of the National Academy of Sciences. 2010;107(36):15975-80.

140. Martin SM, O'Brien GS, Portera-Cailliau C, Sagasti A. Wallerian degeneration of zebrafish trigeminal axons in the skin is required for regeneration and developmental pruning. Development. 2010;137(23):3985-94.

141. O'Connor DH, Peron SP, Huber D, Svoboda K. Neural activity in barrel cortex underlying vibrissa-based object localization in mice. Neuron. 2010;67(6):1048-61.

142. Wood L, Shepherd GMG. Synaptic circuit abnormalities of motor-frontal layer 2/3 pyramidal neurons in a mutant mouse model of Rett syndrome. Neurobiology of disease. 2010;38(2):281-7.

143. O'Connor DH, Clack NG, Huber D, et al. Vibrissa-based object localization in head-fixed mice. Journal of Neuroscience. 2010;30(5):1947-67.

144. Ch'ng YH, Reid RC. Cellular imaging of visual cortex reveals the spatial and functional organization of spontaneous activity. Frontiers in integrative neuroscience. 2010;4.

145. Sato TR, Svoboda K. The functional properties of barrel cortex neurons projecting to the primary motor cortex. Journal of Neuroscience. 2010;30(12):4256-60.

146. Dombeck DA, Harvey CD, Tian L, Looger LL, Tank DW. Functional imaging of hippocampal place cells at cellular resolution during virtual navigation. Nature neuroscience. 2010;13(11):1433-40.

147. Mostany R, Chowdhury TG, Johnston DG, et al. Local hemodynamics dictate long-term dendritic plasticity in peri-infarct cortex. Journal of Neuroscience. 2010;30(42):14116-26.

148. Xu X, Olivas ND, Levi R, Ikrar T, Nenadic Z. High precision and fast functional mapping of cortical circuitry through a novel combination of voltage sensitive dye imaging and laser scanning photostimulation. Journal of neurophysiology. 2010;103(4):2301-12.

149. Yuan T, Gao SS, Saggau P, Oghalai JS. Calcium imaging of inner ear hair cells within the cochlear epithelium of mice using two-photon microscopy. Journal of biomedical optics. 2010;15(1):016002.

150. Niessing J, Friedrich RW. Olfactory pattern classification by discrete neuronal network states. Nature. 2010;465(7294):47-52.

151. Smith SL, Häusser M. Parallel processing of visual space by neighboring neurons in mouse visual cortex. Nature neuroscience. 2010;13(9):1144-9.

152. Andermann ML, Kerlin AM, Reid R. Chronic cellular imaging of mouse visual cortex during operant behavior and passive viewing. Frontiers in Cellular Neuroscience. 2010;4.

153. Yu YJ, Arttamangkul S, Evans CJ, Williams JT, von Zastrow M. Neurokinin 1 receptors regulate morphine-induced endocytosis and desensitization of mu-opioid receptors in CNS neurons. Journal of Neuroscience. 2009;29(1):222-33.

154. Lee CC, Sherman SM. Glutamatergic inhibition in sensory neocortex. Cerebral cortex. 2009;19(10):2281-9.

155. Virk MS, Arttamangkul S, Birdsong WT, Williams JT. Buprenorphine is a weak partial agonist that inhibits opioid receptor desensitization. Journal of Neuroscience. 2009;29(22):7341-8.

156. Zito K, Scheuss V, Knott G, Hill T, Svoboda K. Rapid functional maturation of nascent dendritic spines. Neuron. 2009;61(2):247--258.

157. Knott GW, Holtmaat A, Trachtenberg JT, Svoboda K, Welker E. A protocol for preparing GFP-labeled neurons previously imaged in vivo and in slice preparations for light and electron microscopic analysis. Nature protocols. 2009;4(8):1145-56.

158. Schoenenberger P, Gerosa D, Oertner TG. Temporal control of immediate early gene induction by light. PLoS One. 2009;4(12):e8185.

159. Liu B-hua, Li P, Li Y-tang, et al. Visual receptive field structure of cortical inhibitory neurons revealed by two-photon imaging guided recording. Journal of Neuroscience. 2009;29(34):10520-32.

160. Judkewitz B, Rizzi M, Kitamura K, Häusser M. Targeted single-cell electroporation of mammalian neurons in vivo. Nature protocols. 2009;4(6):862-9.

161. Chia TH, Levene MJ. Microprisms for in vivo multilayer cortical imaging. Journal of neurophysiology. 2009;102(2):1310-4.

162. Simons SB, Escobedo Y, Yasuda R, Dudek SM. Regional differences in hippocampal calcium handling provide a cellular mechanism for limiting plasticity. Proceedings of the National Academy of Sciences of the United States of America. 2009;106(33):14080-4.

163. Christie JM, Jahr CE. Selective expression of ligand-gated ion channels in L5 pyramidal cell axons. Journal of Neuroscience. 2009;29(37):11441.

164. Zhao C, Kao JPY, Kanold PO. Functional excitatory microcircuits in neonatal cortex connect thalamus and layer 4. Journal of Neuroscience. 2009;29(49):15479-88.

165. Watt AJ, Cuntz H, Mori M, et al. Traveling waves in developing cerebellar cortex mediated by asymmetrical Purkinje cell connectivity. Nature neuroscience. 2009;12(4):463-73.

166. Holtmaat A, Bonhoeffer T, Chow DK, et al. Long-term, high-resolution imaging in the mouse neocortex through a chronic cranial window. Nature protocols. 2009;4(8):1128-44.

167. Wood L, Gray NW, Zhou Z, Greenberg ME, Shepherd GMG. Synaptic circuit abnormalities of motor-frontal layer 2/3 pyramidal neurons in an RNA interference model of methyl-CpG-binding protein 2 deficiency. Journal of Neuroscience. 2009;29(40):12440-8.

168. Petrof I, Sherman SM. Synaptic properties of the mammillary and cortical afferents to the anterodorsal thalamic nucleus in the mouse. Journal of Neuroscience. 2009;29(24):7815-9.

169. Golshani P, Gonçalves JT, Khoshkhoo S, et al. Internally mediated developmental desynchronization of neocortical network activity. Journal of Neuroscience. 2009;29(35):10890.

170. Holbro N, Grunditz Å, Oertner TG. Differential distribution of endoplasmic reticulum controls metabotropic signaling and plasticity at hippocampal synapses. Proceedings of the National Academy of Sciences. 2009;106(35):15055.

171. Ding JB, Takasaki KT, Sabatini BL. Supraresolution imaging in brain slices using stimulated-emission depletion two-photon laser scanning microscopy. Neuron. 2009;63(4):429--437.

172. O'Brien G, Rieger S. Two-photon axotomy and time-lapse confocal imaging in live zebrafish embryos. Journal of visualized experiments?: JoVE. 2009.

173. Higley MJM, Soler-Llavina GJ, Sabatini BL. Cholinergic modulation of multivesicular release regulates striatal synaptic potency and integration. Nature neuroscience. 2009;12(9):1121-8.

174. Lewis TL, Mao T, Svoboda K, Arnold DB. Myosin-dependent targeting of transmembrane proteins to neuronal dendrites. Nature neuroscience. 2009;12(5):568-76.

175. Zhong H, Sia GM, Sato TR, et al. Subcellular dynamics of type II PKA in neurons. Neuron. 2009;62(3):363--374.

176. Matter C, Pribadi M, Liu X, Trachtenberg JT. Delta-catenin is required for the maintenance of neural structure and function in mature cortex in vivo. Neuron. 2009;64(3):320-7.

177. Ozden I, Sullivan MR, Lee HM, Wang SS-H. Reliable coding emerges from coactivation of climbing fibers in microbands of cerebellar Purkinje neurons. Journal of Neuroscience. 2009;29(34):10463-73.

178. Chia TH, Levene MJ. In vivo imaging of deep cortical layers using a microprism. Journal of visualized experiments?: JoVE. 2009;(30).

179. Llano DA, Sherman SM. Differences in intrinsic properties and local network connectivity of identified layer 5 and layer 6 adult mouse auditory corticothalamic neurons support a dual corticothalamic projection hypothesis. Cerebral cortex. 2009;19(12):2810-26.

180. Schultz SR, Kitamura K, Post-Uiterweer A, Krupic J, Häusser M. Spatial pattern coding of sensory information by climbing fiber-evoked calcium signals in networks of neighboring cerebellar Purkinje cells. Journal of Neuroscience. 2009;29(25):8005-15.

181. Hoogland TM, Kuhn B, Göbel W, et al. Radially expanding transglial calcium waves in the intact cerebellum. Proceedings of the National Academy of Sciences. 2009;106(9):3496.

182. Tian L, Hires SA, Mao T, et al. Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators. Nature methods. 2009;6(12):875-81.

183. O'Brien GS, Martin SM, Söllner C, et al. Developmentally regulated impediments to skin reinnervation by injured peripheral sensory axon terminals. Current biology. 2009;19(24):2086-90.

184. Dreosti E, Odermatt B, Dorostkar MM, Lagnado L. A genetically encoded reporter of synaptic activity in vivo. Nature methods. 2009;6(12):883-9.

185. Dombeck DA, Graziano MS, Tank DW. Functional clustering of neurons in motor cortex determined by cellular resolution imaging in awake behaving mice. Journal of Neuroscience. 2009;29(44):13751-60.

186. Petreanu L, Mao T, Sternson SM, Svoboda K. The subcellular organization of neocortical excitatory connections. Nature. 2009;457(7233):1142-5.

187. Chow DK, Groszer M, Pribadi M, et al. Laminar and compartmental regulation of dendritic growth in mature cortex. Nature neuroscience. 2009;12(2):116-8.

188. Lee CC, Sherman SM. Synaptic properties of thalamic and intracortical inputs to layer 4 of the first- and higher-order cortical areas in the auditory and somatosensory systems. Journal of neurophysiology. 2008;100(1):317-26.

189. Gregor T, McGregor AP, Wieschaus EF. Shape and function of the Bicoid morphogen gradient in dipteran species with different sized embryos. Developmental biology. 2008;316(2):350-8.

190. Zhang Y-P, Holbro N, Oertner TG. Optical induction of plasticity at single synapses reveals input-specific accumulation of alphaCaMKII. Proceedings of the National Academy of Sciences of the United States of America. 2008;105(33):12039-44.

191. Harvey CD, Yasuda R, Zhong H, Svoboda K. The spread of Ras activity triggered by activation of a single dendritic spine. Science. 2008;321(5885):136-40.

192. Cruz-Martín A, Schweizer FE. Imbalance between excitation and inhibition among synaptic connections of CA3 pyramidal neurons in cultured hippocampal slices. The European journal of neuroscience. 2008;27(6):1353-63.

193. Bigelow AW, Geard CR, Randers-Pehrson G, Brenner DJ. Microbeam-integrated multiphoton imaging system. The Review of scientific instruments. 2008;79(12):123707.

194. Major G, Polsky A, Denk W, Schiller J, Tank DW. Spatiotemporally graded NMDA spike/plateau potentials in basal dendrites of neocortical pyramidal neurons. Journal of neurophysiology. 2008;99(5):2584-601.

195. Riegel AC, Williams JT. CRF facilitates calcium release from intracellular stores in midbrain dopamine neurons. Neuron. 2008;57(4):559--570.

196. Yu J, Anderson CT, Kiritani T, et al. Local-Circuit Phenotypes of Layer 5 Neurons in Motor-Frontal Cortex of YFP-H Mice. Frontiers in neural circuits. 2008;2:6.

197. Grunditz Å, Holbro N, Tian L, Zuo Y, Oertner TG. Spine neck plasticity controls postsynaptic calcium signals through electrical compartmentalization. Journal of Neuroscience. 2008;28(50):13457.

198. Kuhlman SJ, Huang ZJ. High-resolution labeling and functional manipulation of specific neuron types in mouse brain by Cre-activated viral gene expression. PLoS One. 2008;3(4):e2005.

199. Gandhi SP, Yanagawa Y, Stryker MP. Delayed plasticity of inhibitory neurons in developing visual cortex. Proceedings of the National Academy of Sciences. 2008;105(43):16797.

200. Weiler N, Wood L, Yu J, Solla SA, Shepherd GMG. Top-down laminar organization of the excitatory network in motor cortex. Nature neuroscience. 2008;11(3):360-6.

201. Kitamura K, Judkewitz B, Kano M, Denk W, Häusser M. Targeted patch-clamp recordings and single-cell electroporation of unlabeled neurons in vivo. Nature methods. 2008;5(1):61-7.

202. Atasoy D, Aponte Y, Su HH, Sternson SM. A FLEX switch targets Channelrhodopsin-2 to multiple cell types for imaging and long-range circuit mapping. Journal of Neuroscience. 2008;28(28):7025-30.

203. Golshani P, Portera-Cailliau C. In vivo 2-photon calcium imaging in layer 2/3 of mice. Journal of visualized experiments?: JoVE. 2008;(13).

204. Mostany R, Portera-Cailliau C. A method for 2-photon imaging of blood flow in the neocortex through a cranial window. Journal of visualized experiments?: JoVE. 2008;(12).

205. Arttamangkul S, Quillinan N, Low MJ, et al. Differential activation and trafficking of $\mu$-opioid receptors in brain slices. Molecular pharmacology. 2008;74(4):972.

206. Ozden I, Lee HM, Sullivan MR, Wang SS-H. Identification and clustering of event patterns from in vivo multiphoton optical recordings of neuronal ensembles. Journal of neurophysiology. 2008;100(1):495-503.

207. Harvey CD, Ehrhardt AG, Cellurale C, et al. A genetically encoded fluorescent sensor of ERK activity. Proceedings of the National Academy of Sciences. 2008;105(49):19264.

208. Christie JM, Jahr CE. Dendritic NMDA receptors activate axonal calcium channels. Neuron. 2008;60(2):298--307.

209. Mao T, O'Connor DH, Scheuss V, Nakai J, Svoboda K. Characterization and subcellular targeting of GCaMP-type genetically-encoded calcium indicators. PLoS One. 2008;3(3):e1796.

210. Bureau I, Shepherd GMG, Svoboda K. Circuit and plasticity defects in the developing somatosensory cortex of FMR1 knock-out mice. Journal of Neuroscience. 2008;28(20):5178-88.

211. Schoenenberger P, Grunditz A, Rose T, Oertner TG. Optimizing the spatial resolution of Channelrhodopsin-2 activation. Brain cell biology. 2008;36(1-4):119-27.

212. Sato TR, Gray NW, Mainen ZF, Svoboda K. The functional microarchitecture of the mouse barrel cortex. PLoS biology. 2007;5(7):e189.

213. Carter AG, Soler-Llavina GJ, Sabatini BL. Timing and location of synaptic inputs determine modes of subthreshold integration in striatal medium spiny neurons. Journal of Neuroscience. 2007;27(33):8967.

214. Gregor T, Tank DW, Wieschaus EF, Bialek W. Probing the limits to positional information. Cell. 2007;130(1):153--164.

215. Zhang Y-P, Oertner TG. Optical induction of synaptic plasticity using a light-sensitive channel. Nature methods. 2007;4(2):139-41.

216. Dombeck DA, Khabbaz AN, Collman F, Adelman TL, Tank DW. Imaging large-scale neural activity with cellular resolution in awake, mobile mice. Neuron. 2007;56(1):43--57.

217. Petreanu L, Huber D, Sobczyk A, Svoboda K. Channelrhodopsin-2-assisted circuit mapping of long-range callosal projections. Nature neuroscience. 2007;10(5):663-8.

218. Sjöström PJ, Turrigiano GG, Nelson SB. Multiple forms of long-term plasticity at unitary neocortical layer 5 synapses. Neuropharmacology. 2007;52(1):176-84.

219. Huber D, Petreanu L, Ghitani N, et al. Sparse optical microstimulation in barrel cortex drives learned behaviour in freely moving mice. Nature. 2007;451(7174):61--64.

220. Lam Y-W, Sherman SM. Different topography of the reticulothalmic inputs to first- and higher-order somatosensory thalamic relays revealed using photostimulation. Journal of neurophysiology. 2007;98(5):2903-9.

221. Harvey CD, Svoboda K. Locally dynamic synaptic learning rules in pyramidal neuron dendrites. Nature. 2007;450(7173):1195--1200.

222. Sobczyk A, Svoboda K. Activity-dependent plasticity of the NMDA-receptor fractional Ca2+ current. Neuron. 2007;53(1):17--24.

223. Gregor T, Wieschaus EF, McGregor AP, Bialek W, Tank DW. Stability and nuclear dynamics of the bicoid morphogen gradient. Cell. 2007;130(1):141-52.

224. Birbach A, Verkuyl JM, Matus A. Reversible, activity-dependent targeting of profilin to neuronal nuclei. Experimental cell research. 2006;312(12):2279-87.

225. Arttamangkul S, Torrecilla M, Kobayashi K, Okano H, Williams JT. Separation of $\mu$-Opioid Receptor Desensitization and Internalization: Endogenous Receptors in Primary Neuronal Cultures. Journal of Neuroscience. 2006;26(15):4118.

226. Soler-Llavina GJ, Sabatini BL. Synapse-specific plasticity and compartmentalized signaling in cerebellar stellate cells. Nature neuroscience. 2006;9(6):798-806.

227. Papageorgas P, Maroulis D, Anagnostopoulos G, et al. A high-performance imaging and control system for a micromirror-based laser-scanning endoscope device. IEEE Transactions on Instrumentation and Measurement. 2006;55(5):1725 - 1733.

228. Vigot R, Barbieri S, Bräuner-Osborne H, et al. Differential compartmentalization and distinct functions of GABAB receptor variants. Neuron. 2006;50(4):589--601.

229. Bureau I, von Saint Paul F, Svoboda K. Interdigitated paralemniscal and lemniscal pathways in the mouse barrel cortex. PLoS biology. 2006;4(12):e382.

230. Lam Y-W, Nelson CS, Sherman SM. Mapping of the functional interconnections between thalamic reticular neurons using photostimulation. Journal of neurophysiology. 2006;96(5):2593-600.

231. Scheuss V, Yasuda R, Sobczyk A, Svoboda K. Nonlinear [Ca2+] signaling in dendrites and spines caused by activity-dependent depression of Ca2+ extrusion. Journal of Neuroscience. 2006;26(31):8183.

232. Sjöström PJ, Häusser M. A cooperative switch determines the sign of synaptic plasticity in distal dendrites of neocortical pyramidal neurons. Neuron. 2006;51(2):227-38.

233. Holtmaat A, Wilbrecht L, Knott GW, Welker E, Svoboda K. Experience-dependent and cell-type-specific spine growth in the neocortex. Nature. 2006;441(7096):979-83.

234. De Paola V, Holtmaat A, Knott G, et al. Cell type-specific structural plasticity of axonal branches and boutons in the adult neocortex. Neuron. 2006;49(6):861--875.

235. Knott GW, Holtmaat A, Wilbrecht L, Welker E, Svoboda K. Spine growth precedes synapse formation in the adult neocortex in vivo. Nature neuroscience. 2006;9(9):1117-24.

236. Gray NW, Weimer RM, Bureau I, Svoboda K. Rapid redistribution of synaptic PSD-95 in the neocortex in vivo. PLoS Biology. 2006;4(11):e370.

237. Yasuda R, Harvey CD, Zhong H, et al. Supersensitive Ras activation in dendrites and spines revealed by two-photon fluorescence lifetime imaging. Nature neuroscience. 2006;9(2):283--291.

238. Portera-Cailliau C, Weimer RM, De Paola V, Caroni P, Svoboda K. Diverse modes of axon elaboration in the developing neocortex. PLoS Biology. 2005;3(8):e272.

239. Sternson SM, Shepherd GMG, Friedman JM. Topographic mapping of VMH --> arcuate nucleus microcircuits and their reorganization by fasting. Nature neuroscience. 2005;8(10):1356-63.

240. Sobczyk A, Scheuss V, Svoboda K. NMDA receptor subunit-dependent [Ca2+] signaling in individual hippocampal dendritic spines. Journal of Neuroscience. 2005;25(26):6037.

241. Holtmaat AJGD, Trachtenberg JT, Wilbrecht L, et al. Transient and persistent dendritic spines in the neocortex in vivo. Neuron. 2005;45(2):279-91.

242. Egger V, Svoboda K, Mainen ZF. Dendrodendritic synaptic signals in olfactory bulb granule cells: local spine boost and global low-threshold spike. Journal of Neuroscience. 2005;25(14):3521.

243. Ohki K, Chung S, Ch'ng YH, Kara P, Reid RC. Functional imaging with cellular resolution reveals precise micro-architecture in visual cortex. Nature. 2005;433(7026):597-603.

244. Ngo-Anh TJ, Bloodgood BL, Lin M, et al. SK channels and NMDA receptors form a Ca2+-mediated feedback loop in dendritic spines. Nature neuroscience. 2005;8(5):642-9.

245. Shepherd GMG, Svoboda K. Laminar and columnar organization of ascending excitatory projections to layer 2/3 pyramidal neurons in rat barrel cortex. Journal of Neuroscience. 2005;25(24):5670-9.

246. Gregor T, Bialek W, de Ruyter van Steveninck RR, Tank DW, Wieschaus EF. Diffusion and scaling during early embryonic pattern formation. Proceedings of the National Academy of Sciences of the United States of America. 2005;102(51):18403-7.

247. Shepherd GMG, Stepanyants A, Bureau I, Chklovskii D, Svoboda K. Geometric and functional organization of cortical circuits. Nature neuroscience. 2005;8(6):782-90.

248. Song S, Sjöström PJ, Reigl M, Nelson S, Chklovskii DB. Highly nonrandom features of synaptic connectivity in local cortical circuits. PLoS biology. 2005;3(3):e68.

249. Bureau I, Shepherd GMG, Svoboda K. Precise development of functional and anatomical columns in the neocortex. Neuron. 2004;42(5):789-801.

250. Nimchinsky EA, Yasuda R, Oertner TG, Svoboda K. The number of glutamate receptors opened by synaptic stimulation in single hippocampal spines. Journal of Neuroscience. 2004;24(8):2054.

251. Brünig I, Kaech S, Brinkhaus H, Oertner TG, Matus A. Influx of extracellular calcium regulates actin-dependent morphological plasticity in dendritic spines. Neuropharmacology. 2004;47(5):669--676.

252. Wang Y, Guo HF, Pologruto TA, et al. Stereotyped odor-evoked activity in the mushroom body of Drosophila revealed by green fluorescent protein-based Ca2+ imaging. Journal of Neuroscience. 2004;24(29):6507.

253. Pologruto TA, Yasuda R, Svoboda K. Monitoring neural activity and [Ca2+] with genetically encoded Ca2+ indicators. Journal of Neuroscience. 2004;24(43):9572.

254. Zito K, Knott G, Shepherd GMG, Shenolikar S, Svoboda K. Induction of spine growth and synapse formation by regulation of the spine actin cytoskeleton. Neuron. 2004;44(2):321-34.

255. Carter AG, Sabatini BL. State-dependent calcium signaling in dendritic spines of striatal medium spiny neurons. Neuron. 2004;44(3):483-93.

256. Shepherd GMG, Pologruto TA, Svoboda K. Circuit analysis of experience-dependent plasticity in the developing rat barrel cortex. Neuron. 2003;38(2):277-89.

257. Egger V, Svoboda K, Mainen ZF. Mechanisms of Lateral Inhibition in the Olfactory Bulb: Efficiency and Modulation of Spike-Evoked Calcium Influx into Granule Cells. Journal of Neuroscience. 2003;23(20):7551-7558.

258. Trachtenberg JT, Chen BE, Knott GW, et al. Long-term in vivo imaging of experience-dependent synaptic plasticity in adult cortex. Nature. 2002;420(6917):788-94.